Publications

Total found: 36 records
Adl S.M., Bass D., Lane C., Lukeš J., Schoch C., Smirnov A., Agatha S. , Berney C., Brown M.W., Burki F., Cárdenas P., Čepička I., Chistyakova L., del Campo J., Dunthorn M., Edvardsen B., Eglit Y., Guillou L. , Hampl V., Heiss A.A., Hoppenrath M., James T.Y., Karnowska J., Karpov S., Kim E., Kolísko M., Kudryavtsev A., Lahr D.J.G., Lara E., Le Gall L., Lynn D., Mann D. G., Massana R., Mitchell E., Morrow Ch., Pawlowski J., Powel M.J., Richter D.J., Rueckert S., Shadwick L., Shimano S., Spiegel F., Torruella G., Youssef N., Zlatogursky V., Zhang Q. (2019) Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Journal of Eukaryotic Microbiology 66: 4–119.
DOI: 10.1111/jeu.12691

Documents to download:
Adl et al. 2019 (pdf)
Mathur V., Kolísko M., Hehenberger E., Irwin N.A.T., Leander B., Kristmundsson Á., Freeman M., Keeling P. (2019) Multiple Independent Origins of Apicomplexan-Like Parasites Current Biology 29: 2936–2941.e5.
DOI: 10.1016/j.cub.2019.07.019
Treitli S.C., Kolísko M., Husník F., Keeling P., Hampl V. (2019) Revealing the metabolic capacity of Streblomastix strix and its bacterial symbionts using single-cell metagenomics. Proceedings of the National Academy of Sciences of the United States of America 39: 19675–19684.
DOI: 10.1073/pnas.1910793116
del Campo J., Kolísko M., Boscaro V., Santoferrara F., Nenarokov S., Massana R., Guillou L. , Simpson A., Berney C., de Vargas C., Brown M.W., Keeling P., Wegener Parfrey L. (2018) EukRef: phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution PLoS Biology 16: e2005849.
DOI: 10.1371/journal.pbio.2005849
Heiss A.A., Kolísko M., Ekelund F., Brown M.W., Roger A., Simpson A. (2018) Combined morphological and phylogenomic re-examination of malawimonads, a critical taxon for inferring the evolutionary history of eukaryotes Royal Society Open Science 5: 171707.
DOI: 10.1098/rsos.171707
Lynn D., Kolísko M., Bourland W. (2018) Phylogenomic Analysis of Nassula variabilis n. sp., Protist 169: 180-189.
DOI: 10.1016/j.protis.2018.02.002
Mathur V., del Campo J., Kolísko M., Keeling P. (2018) Global diversity and distribution of close relatives of apicomplexan parasites. Environmental Microbiology 20: 8.
DOI: 10.1111/1462-2920.14134
Pyrihová E., Motyčková A., Voleman L. , Wandyszewska N., Fišer R., Seydlová G., Roger A., Roger A., Kolísko M., Doležal P. (2018) A Single Tim Translocase in the Mitosomes of Giardia intestinalis Illustrates Convergence of Protein Import Machines in Anaerobic Eukaryotes Genome Biology and Evolution 10: 2813–2822.
DOI: 10.1093/gbe/evy215
Strassert J., Karnkowska A., Hehenberger E., del Campo J., Kolísko M., Okamoto N., Burki F., Janouškovec J., Poirier C., Leonard G., Hallam S.J., Richards T., Worden A., Santoro A., Keeling P. (2018) Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates ISME Journal 12: 304-308.
DOI: 10.1038/ismej.2017.167
Vacek V., Novák L.V.F., Treitli S.C., Táborský P., Čepička I., Kolísko M., Keeling P., Hampl V. (2018) Fe-S Cluster Assembly in Oxymonads and Related Protists Molecular Biology and Evolution 35: 2712–2718.
DOI: 10.1093/molbev/msy168
Boscaro V., Kolísko M., Felletti M., Vannini C., Lynn D., Keeling P. (2017) Parallel genome reduction in symbionts descended from closely related free-living bacteria Nature Ecology & Evolution 1: 1160-1167.
DOI: 10.1038/s41559-017-0237-0
del Campo J., James E., Hirakawa Y., Fiorito R., Kolísko M., Irwin N.A.T., Mathur V., Boscaro V., Hehenberger E., Karnkowska A., Scheffrahn R., Keeling P. (2017) Pseudotrichonympha leei, Pseudotrichonympha lifesoni, and Pseudotrichonympha pearti, new species of parabasalian flagellates and the description of a rotating subcellular structure Scientific Reports 7: 16349.
DOI: 10.1038/s41598-017-16259-8
Hehenberger E., Tikhonenkov D.V., Kolísko M., del Campo J., Esaulov A.S., Mylnikov A.P., Keeling P. (2017) Novel Predators Reshape Holozoan Phylogeny and Reveal the Presence of a Two-Component Signaling System in the Ancestor of Animals Current Biology 27: 1-8.
DOI: 10.1016/j.cub.2017.06.006
Lynn D., Kolísko M. (2017) Molecules illuminate morphology: phylogenomics confirms convergent evolution among ‘oligotrichous’ ciliates International Journal of Systematic and Evolutionary Microbiology 67: 3676-3682.
DOI: 10.1099/ijsem.0.002060
Pyrih J., Pyrihová E., Kolísko M., Stojanovová D., Basu S., Harant K., Haindrich A., Doležal P., Lukeš J., Roger A., Tachezy J. (2016) Minimal cytosolic iron-sulfur cluster assembly machinery in Giardia intestinalis is partially associated with mitosomes Molecular Microbiology 102: 701-714.
DOI: 10.1111/mmi.13487

Documents to download:
Pyrih et al 2016 MM (pdf)
Woo Y., Ansari H., Otto T.D., Klinger C., Kolísko M., Michálek J., Saxena A., Shanmugam D., Tayyrov A., Veluchamy A., Ali S., Bernal A., Del C., Cihlář J., Flegontov P., Gornik S., Hajdušková E., Horák A., Janouškovec J., Katris N., Mast F., Miranda-Saavedra D., Mourier T., Naeem R., Nair M., Panigrahi A., Rawlings N., Regelado E., Ramaprasad A., Samad N., Tomčala A., Wilkes J., Neafsey D., Doerig C., Bowler C., Keeling P., Roos D., Dacks J., Templeton T., Waller R., Lukeš J., Oborník M., Pain A. (2015) "Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites " eLife 4: e06974.
DOI: 10.7554/eLife.06974

Documents to download:
Woo_et_al_eLife_2015 (pdf)

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Biology Centre CAS
Institute of Parasitology
Branišovská 1160/31
370 05 České Budějovice

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