| Total found: 36 records |
del Campo J., Carlos-Oliveira M., Čepička I.,
Hehenberger E.,
Horák A., Karnkowska A.,
Kolísko M., Lara E.,
Lukeš J., Pánek T., Piwosz K., Richter D.J., Škaloud P., Šuťák R., Tachezy J., Hampl V. (2024) The protist cultural renaissance Trends in Microbiology
32: 128-131.
DOI: 10.1016/j.tim.2023.11.010
Documents to download:
delCampo_2024_TrendsParasitol (pdf)
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Jones R.E., Tice A.K., Eliáš M., Eme L.,
Kolísko M.,
Nenarokov S., Pánek T., Rokas A.,
Salomaki E., Strassert J., Shen X.X., Žihala D., Brown M.W. (2024) Create, analyze, and visualize phylogenomic datasets using PhyloFisher Current Protocols
4: e969.
DOI: 10.1002/cpz1.969
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Kolísko M., Maciszewski K., Karnkowska A. (2024) CHAPTER: Plastid evolution in non-photosynthetic lineages In: S.D. Schwartzbach, P.G. Kroth, M. Oborník (Eds.) Endosymbiotic Organelle Acquisition
Springer, Cham: pp. 203–237.
DOI: 10.1007/978-3-031-57446-7_7
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Lukeš J., Čepička I.,
Kolísko M. (2024) Evolution: No end in sight for novel incredible (heterotrophic) protists Current Biology
34: R53–R74.
DOI: 10.1016/j.cub.2023.10.065
Documents to download:
Lukes_2024_CurrBiol (pdf)
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Rotterová J., Pánek T.,
Salomaki E., Kotyk M., Táborský P.,
Kolísko M., Čepička I. (2024) Single cell transcriptomics reveals UAR codon reassignment in Palmarella salina (Metopida, Armophorea) and confirms Armophorida belongs to APM clade Molecular Phylogenetics and Evolution
191: 107991.
DOI: 10.1016/j.ympev.2023.107991
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Wisniewska M.,
Salomaki E.,
Silberman J., Terpis K.X., Mazancová E.,
Táborský P., Jinatham V., Gentekaki E., Čepička I.,
Kolísko M. (2024) Expanded gene and taxon sampling of diplomonads shows multiple switches to parasitic and free-living lifestyle BMC Biology
22: 217.
DOI: 10.1186/s12915-024-02013-w
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Hehenberger E., Boscaro V., James E., Hirakawa Y., Trznadel M., Mtawali M., Fiorito R., del Campo J., Karnkowska A.,
Kolísko M., Irwin N.A.T., Mathur V., Scheffrahn R., Keeling P. (2023) New Parabasalia symbionts Snyderella spp. and Daimonympha gen. nov. from South American Rugitermes termites and the parallel evolution of a cell with a rotating "head" Journal of Eukaryotic Microbiology
70: e12987.
DOI: 10.1111/jeu.12987
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Mathur V.,
Salomaki E., Wakeman K.C., Na I., Kwong W.K.,
Kolísko M., Keeling P. (2023) Reconstruction of plastid proteomes of apicomplexans and close relatives reveals the major evolutionary outcomes of cryptic plastids Molecular Biology and Evolution
40: msad002.
DOI: 10.1093/molbev/msad002
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Obiol A., López-Escardó D.,
Salomaki E.,
Wisniewska M., Forn I., Sà E., Vaqué D.,
Kolísko M., Massana R. (2023) Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory Microbiome
11: 134.
DOI: 10.1186/s40168-023-01571-5
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Lax G.,
Kolísko M., Eglit Y., Lee W.J., Yubuki N., Karnkowska A., Leander B., Burger G., Keeling J., Simpson A. (2021) Multigene phylogenetics of euglenids based on single-cell transcriptomics of diverse phagotrophs Molecular Phylogenetics and Evolution
159: 107088.
DOI: 10.1016/j.ympev.2021.107088
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Salas-Leiva D.E., Tromer E.C., Curtis B., Jerlström-Hultqvist J.,
Kolísko M., Yi Z., Salas-Leiva J.S., Gallot-Lavallée L., Williams S.K., Kops G., Archibald J. M., Simpson A., Roger A. (2021) Genomic analysis finds no evidence of canonical eukaryotic DNA processing complexes in a free-living protist Nature Communications
12: 6003.
DOI: 10.1038/s41467-021-26077-2
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Salomaki E., Terpis K.X., Rueckert S., Kotyk M., Varadínová Z.K., Čepička I., Lane C.,
Kolísko M. (2021) Gregarine single-cell transcriptomics reveals differential mitochondrial remodeling and adaptation in apicomplexans BMC Biology
19: 77.
DOI: 10.1186/s12915-021-01007-2
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Singh R.A., Boscaro V., James E., Karnkowska A.,
Kolísko M., Gavelis G.S., Okamoto N., del Campo J., Fiorito R., Hehenberger E., Irwin N.A.T., Mathur V., Scheffrahn R., Keeling P. (2021) Characterization of new cristamonad species from kalotermitid termites including a novel genus, Runanympha Scientific Reports
11: 7270.
DOI: 10.1038/s41598-021-86645-w
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Stairs C.W., Táborský P.,
Salomaki E.,
Kolísko M., Pánek T., Eme L., Hradilová M., Vlček Č., Jerlström-Hultqvist J., Roger A., Čepička I. (2021) Anaeramoebae are a divergent lineage of eukaryotes that shed light on the transition from anaerobic mitochondria to hydrogenosomes Current Biology
31: 5605-5612.e5.
DOI: 10.1016/j.cub.2021.10.010
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Tice A.K., Žihala D., Pánek T., Jones R.E.,
Salomaki E.,
Nenarokov S., Burki F., Eliáš M., Eme L., Roger A., Rokas A., Shen X.X., Strassert J.,
Kolísko M., Brown M.M. (2021) PhyloFisher: A phylogenomic package for resolving eukaryotic relationships PLoS Biology
19: e3001365.
DOI: 10.1371/journal.pbio.3001365
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Alama Bermejo G., Myer E., Atkinson S.D.,
Holzer A.,
Wisniewska M.,
Kolísko M., Bartholomew J. (2020) Transcriptome-wide comparisons and virulence gene polymorphisms of host-associated genotypes of the cnidarian parasite Ceratonova shasta in salmonids. Genome Biology and Evolution
12: 1258–1276.
DOI: 10.1093/gbe/evaa109
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Kolísko M.,
Flegontova O., Karnkowska A., Lax G., Maritz J.M., Pánek T.,
Táborský P., Carlton J.M., Čepička I.,
Horák A.,
Lukeš J., Simpson A., Tai V. (2020) EukRef-excavates: seven curated SSU ribosomal RNA gene databases Database
2020: baaa080.
DOI: 10.1093/database/baaa080
Documents to download:
Kolisko_2020_Database (pdf)
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Lhotská Z.,
Jirků M.,
Hložková O.,
Brožová K.,
Jirsová D., Stensvold C.,
Kolísko M.,
Jirků-Pomajbíková K. (2020) A Study on the Prevalence and Subtype Diversity of the Intestinal Protist Blastocystis sp. in a Gut-Healthy Human Population in the Czech Republic Frontiers in Cellular and Infection Microbiology
10: 544335.
DOI: 10.3389/fcimb.2020.544335
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Rotterová J.,
Salomaki E., Pánek T., Bourland W., Žihala D.,
Táborský P., Edgcomb V., Beinart R.A.,
Kolísko M., Čepička I. (2020) Genomics of new ciliate lineages provides insight into the evolution of obligate anaerobiosis Current Biology
30: 2037-2050.e6.
DOI: 10.1016/j.cub.2020.03.064
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Salomaki E., Eme L., Brown M.W.,
Kolísko M. (2020) Response to Preuss and Zuccarello (2020): biological definitions that can be unambiguously applied for red algal parasites Journal of Phycology
56: 833-835.
DOI: 10.1111/jpy.12987
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